Protein ZmYAB8
ZmYAB8 is a protein in the C2C2-YABBY family.
Information
TF Name: ZmYAB8
Species: Maize
TF Family: C2C2-YABBY
Gene Name(Synonym): YAB15
Uniprot ID: B4FSG0

Protein ZmYAB8

ZmYAB8 is a protein in the C2C2-YABBY family.

Overview of domains present in v5 transcripts
PF04690PF09011
Zm00001eb248640_T001
Zm00001eb248640_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d017391DAPseq no logo sequence fimo position
Zm00001d017391DAPseq no logo sequence fimo position
Zm00001d017391ChIPseq no logo sequence fimo position
Zm00001d017391PChIPseq no logo sequence fimo position

Interactions where ZmYAB8 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmYAB8 is the target  
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There are 153 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb248640_T001 from maize genome v5

Amino Acid Sequence
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MMSSSSSSSSSAACCFPLDHLAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPPAAPA
PPNHLNFAHSLLSPTSPHGLLDELALQQAPSFLMEQASANLSSTMTGRSSNSSCASNLPPPAPMPAAQPVQQEAELPKTA
PSVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGLMPDQGLKKTFKTHQDGAEDMLL
KDDLYAAAAAAAAANMGITPF

MMSSSSSSSSSAACCFPLDHLAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPPAAPA
PPNHLNFAHSLLSPTSPHGLLDELALQQAPSFLMEQASANLSSTMTGRSSNSSCASNLPPPAPMPAAQPVQQEAELPKTA
PSVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGLMPDQGLKKTFKTHQDGAEDMLL
KDDLYAAAAAAAAANMGITPF

MMSSSSSSSSSAACCFPLDHLAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPPAAPA
PPNHLNFAHSLLSPTSPHGLLDELALQQAPSFLMEQASANLSSTMTGRSSNSSCASNLPPPAPMPAAQPVQQEAELPKTA
PSVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGLMPDQGLKKTFKTHQDGAEDMLL
KDDLYAAAAAAAAANMGITPF

MMSSSSSSSSSAACCFPLDHLAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPPAAPA
PPNHLNFAHSLLSPTSPHGLLDELALQQAPSFLMEQASANLSSTMTGRSSNSSCASNLPPPAPMPAAQPVQQEAELPKTA
PSVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGLMPDQGLKKTFKTHQDGAEDMLL
KDDLYAAAAAAAAANMGITPF

MMSSSSSSSSSAACCFPLDHLAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPPAAPA
PPNHLNFAHSLLSPTSPHGLLDELALQQAPSFLMEQASANLSSTMTGRSSNSSCASNLPPPAPMPAAQPVQQEAELPKTA
PSVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGLMPDQGLKKTFKTHQDGAEDMLL
KDDLYAAAAAAAAANMGITPF

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF04690
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Nucleotide Sequence
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ACACACCCCATGCCTTGCCTCCTCC...

GRMZM2G529859_T01 from maize genome v3

Amino Acid Sequence
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MLHCLSLICVHNQWAHFPHIHFGLMPDQGLKKTFKTHQDGAEDMLLKDDLYAAAAAAAAANMGITPF

Nucleotide Sequence
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TTTCAGTATTTGCTTCCAAGTACTC...

GRMZM2G529859_T02 from maize genome v3


Related TFome: pUT3390

Amino Acid Sequence
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MRAQVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPPAAPAPPNHLNFAHSLLSPTSPHGLLDELALQQAPSFLMEQAS
ANLSSTMTGRSSNSSCASNLPPPAPMPAAQPVQQEAELPKTAPSVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHR
EAFSAAAKNWAHFPHIHFGLMPDQGLKKTFKTHQDGAEDMLLKDDLYAAAAAAAAANMGITPF

Nucleotide Sequence
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CACCAGCTAGCCTCTCCCACTTCTT...

Zm00001d017391_T001 from maize genome v4

Amino Acid Sequence
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MMSSSSSSSSSAACCFPLDHLAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPPAAPA
PPNHLNFAHSLLSPTSPHGLLDELALQQAPSFLMEQASANLSSTMTGRSSNSSCASNLPPPAPMPAAQPVQQEAELPKTA
PSVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNVTFFRLLLQTHICTAVTTTRG

Nucleotide Sequence
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ACACACCCCATGCCTTGCCTCCTCC...

Zm00001d017391_T002 from maize genome v4

Amino Acid Sequence
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MMSSSSSSSSSAACCFPLDHLAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPPAAPA
PPNHLNFAHSLLSPTSPHGLLDELALQQAPSFLMEQASANLSSTMTGRSSNSSCASNLPPPAPMPAAQPVQQEAELPKTA
PSVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGLMPDQGLKKTFKTHQDGAEDMLL
KDDLYAAAAAAAAANMGITPF

Nucleotide Sequence
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ACACACCCCATGCCTTGCCTCCTCC...

Zm00001d017391_T003 from maize genome v4

Amino Acid Sequence
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MLHCLSLICVHNQWAHFPHIHFGLMPDQGLKKTFKTHQDGAEDMLLKDDLYAAAAAAAAANMGITPF

Nucleotide Sequence
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ACACACCCCATGCCTTGCCTCCTCC...

Zm00001d017391_T004 from maize genome v4

Amino Acid Sequence
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MRAQVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPPAAPAPPNHLNFAHSLLSPTSPHGLLDELALQQAPSFLMEQAS
ANLSSTMTGRSSNSSCASNLPPPAPMPAAQPVQQEAELPKTAPSVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHR
EAFSAAAKNWAHFPHIHFGLMPDQGLKKTFKTHQDGAEDMLLKDDLYAAAAAAAAANMGITPF

Nucleotide Sequence
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GCAGTGTTGACTGATTCGTCTCTCT...

Zm00001d017391_T005 from maize genome v4

Amino Acid Sequence
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MMSSSSSSSSSAACCFPLDHLAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPPAAPA
PPNHLNFAHSLLSPTSPHGLLDELALQQAPSFLMEQASANLSSTMTGRSSNSSCASNLPPPAPMPAAQPVQQEAELPKTA
PSVNRRKDFLFFLFPIFGSPISLSLSLSLSLSLSLSLLFFITFCFTFPNQGYLSLH

Nucleotide Sequence
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ACACACACCTGACTCTCCTCCATCC...

Zm00001eb248640_T002 from maize genome v5

Amino Acid Sequence
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MRAQVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPPAAPAPPNHLNFAHSLLSPTSPHGLLDELALQQAPSFLMEQAS
ANLSSTMTGRSSNSSCASNLPPPAPMPAAQPVQQEAELPKTAPSVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHR
EAFSAAAKNWAHFPHIHFGLMPDQGLKKTFKTHQDGAEDMLLKDDLYAAAAAAAAANMGITPF

Nucleotide Sequence
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CACCAGCTAGCCTCTCCCACTTCTT...


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